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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8361298_8362518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8361298 - 8362518

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTAATTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATCTTACTAATT

Flanking Amino Acid:

LQCIAYRAPEVLLTEMMERC

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.4

1.09

0.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.4

0.59

69.1

41.6

Minor 5ss

35.1

-1.7

2.7

41.5

45.1

Minor BPS

49.9

0.08

1.9

71.75

39.4

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085