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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8363372_8365256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8363372 - 8365256

Intron Length:

1885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCTAC

5'SS Class:

major

3'SS Sequence:

TCTTTTAATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTCTTTTAATA

Flanking Amino Acid:

AVYARAYLCRVGMEVAPQLK

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

60.2

41.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.9

77.5

34.6

Minor 5ss

42.3

-0.8

3.2

49.5

47.1

Minor BPS

61.5

0.36

1.3

63.33

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029103

8360807 - 8376864

16058

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085