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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8368591_8369616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8368591 - 8369616

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTTTCTTGAAAC

Flanking Amino Acid:

VLITDILDTFGKLVYERILS

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.8

83.1

28.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

73.1

0.52

39.4

Minor 5ss

-1.7

2.8

42.6

38.5

Minor BPS

63.4

0.4

1.6

72.41

38.6

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040188

8325703 - 8380787

55085

ENSAPLT00000029103

8360807 - 8376864

16058

ENSAPLT00000013785

8325703 - 8380787

55085