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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8372851_8373804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8372851 - 8373804

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTCTTGTTAATT

Flanking Amino Acid:

RLEELDDLEEGSQKELLNLT

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

84.4

0.85

34.5

Major PPT

67.6

0.4

1.2

42.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

57.1

0.3

2.1

74.4

43.5

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029103

8360807 - 8376864

16058

ENSAPLT00000024949

8325703 - 8373969

48267

ENSAPLT00000013785

8325703 - 8380787

55085

ENSAPLT00000040188

8325703 - 8380787

55085