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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8373882_8374895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8373882 - 8374895

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

AGTCCCCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGAAACTAAAAT

Flanking Amino Acid:

SINLYMGSEKGKATTTGSAV

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

0.54

0.9

65.6

35.5

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

47.1

-0.1

65.3

Associated Gene:

Gene:

VPS35L

Ensembl Gene ID:

ENSAPLG00000013151

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029103

8360807 - 8376864

16058