Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8391313_8391591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8391313 - 8391591

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACATAA

5'SS Class:

major

3'SS Sequence:

CTATTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAATTTTTAACT

Flanking Amino Acid:

ASLHERVMAQLRAALYDIHD

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

32.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.7

0.69

0.8

73.5

36.8

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

73.6

0.82

1.1

80.1

35.3

Associated Gene:

Gene:

CCP110

Ensembl Gene ID:

ENSAPLG00000012915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013452

8388645 - 8399918

11274