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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8398429_8399777_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8398429 - 8399777

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TGTTTCTTACGC

Flanking Amino Acid:

FHGVPVLSPLLNFEKKKEIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

57.1

0.2

1.9

70.25

41.4

Associated Gene:

Gene:

CCP110

Ensembl Gene ID:

ENSAPLG00000012915

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013452

8388645 - 8399918

11274