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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8407503_8411811_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8407503 - 8411811

Intron Length:

4309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTTGGCTT

5'SS Class:

weak_major

3'SS Sequence:

GTAACAGACACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GTATAAGTAACA

Flanking Amino Acid:

SSSFTFILFKIQNMHQKAET

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.2

43.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

51.8

0.04

1.1

43.1

41.3

Minor 5ss

40.8

-1

3.3

57.8

40.8

Minor BPS

46.1

-0.3

2.3

63.69

41.7

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022050

8407344 - 8424043

16700