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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8411924_8413098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8411924 - 8413098

Intron Length:

1175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TATTTATTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

CTTTATTTATTT

Flanking Amino Acid:

LFFFILSTIFLIITYLYWQI

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

88.7

0.96

0.8

36.5

Major PPT

83.8

0.76

0.8

82.3

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

57.4

0.31

1.8

76.23

41.2

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022050

8407344 - 8424043

16700

ENSAPLT00000013308

8407698 - 8424046

16349