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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8413273_8414165_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8413273 - 8414165

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCACACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GAAGCTTTAAAT

Flanking Amino Acid:

VLAVIAVTVWRLKPSEECGP

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.6

42.7

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

74.3

0.55

0.9

69.7

35.5

Minor 5ss

30.2

-2.3

3.3

38.2

Minor BPS

0.33

1.5

68.24

42.1

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022050

8407344 - 8424043

16700

ENSAPLT00000013308

8407698 - 8424046

16349