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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8414300_8415514_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8414300 - 8415514

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAAGC

5'SS Class:

major

3'SS Sequence:

CATCTCTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATCTCTTAAAA

Flanking Amino Acid:

SFFIVFYVKKVSLMKNCQPP

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.9

41.1

Major BPS

100

1.24

0.5

100

Major PPT

62.8

0.29

1.1

35.5

Minor 5ss

39.4

-1.2

2.9

52.8

43.9

Minor BPS

62.6

0.39

1.4

67.11

38.8

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013308

8407698 - 8424046

16349

ENSAPLT00000022050

8407344 - 8424043

16700