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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8415591_8416185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8415591 - 8416185

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATAA

Flanking Amino Acid:

LDLIYAQTLTWIGILFSPLL

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.5

0.66

0.9

81.2

30.9

Minor 5ss

34.5

-1.8

3.3

46.4

44.2

Minor BPS

67.8

0.56

1.7

80.24

35.5

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022050

8407344 - 8424043

16700

ENSAPLT00000013308

8407698 - 8424046

16349