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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8418627_8420595_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8418627 - 8420595

Intron Length:

1969

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAAAGAAG

5'SS Class:

weak_major

3'SS Sequence:

GGTGTGTAAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGTAA

U12 Branch Point Sequence:

TGGTGTGTAAGA

Flanking Amino Acid:

KVQNTGDAKRCSNMTDGHPA

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.4

53.1

43.9

Major BPS

48.9

-0

1.5

49.4

Major PPT

48.5

-0

1.2

46.4

44.3

Minor 5ss

22.6

-3.2

30.7

Minor BPS

41.9

-0.6

2.5

54.95

44.5

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022050

8407344 - 8424043

16700