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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8420029_8420595_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8420029 - 8420595

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAAAGAAG

5'SS Class:

weak_major

3'SS Sequence:

GTAAACAAGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCTGATGTAAAC

Flanking Amino Acid:

KVQNTGDAKRFLNFSKQETL

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.4

53.1

43.9

Major BPS

0.72

38.9

Major PPT

44.6

-0.3

1.2

35.8

39.1

Minor 5ss

22.6

-3.2

30.7

Minor BPS

43.2

-0.5

2.2

55.76

42.9

Associated Gene:

Gene:

TMC5

Ensembl Gene ID:

ENSAPLG00000012753

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013308

8407698 - 8424046

16349