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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8442217_8442416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8442217 - 8442416

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACTAT

U12 Branch Point Sequence:

TTTCTTTTAACA

Flanking Amino Acid:

SFAKISPKNTDSLCTVYTPS

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

78.6

35.9

Major BPS

62.1

0.3

1.4

61.1

Major PPT

87.2

0.84

0.8

84.6

28.7

Minor 5ss

43.3

-0.7

60.2

44.5

Minor BPS

78.7

0.9

84.25

28.8

Associated Gene:

Gene:

TMC7

Ensembl Gene ID:

ENSAPLG00000012425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012984

8438396 - 8451270

12875