Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8446847_8447776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8446847 - 8447776

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ACTTTTAAAATT

Flanking Amino Acid:

PAFEIKLTLLRCVFVRLANI

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

47.5

-0.1

1.8

65.91

39.8

Associated Gene:

Gene:

TMC7

Ensembl Gene ID:

ENSAPLG00000012425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012984

8438396 - 8451270

12875