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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8450399_8451155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8450399 - 8451155

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTGTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TAAGGTATAATG

Flanking Amino Acid:

AFAVPFFMVVCLIMFYFIAL

Intron Amino Acid Position:

660

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

81.2

0.7

0.9

76.5

37.5

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

42.4

-0.7

45.79

41.2

Associated Gene:

Gene:

TMC7

Ensembl Gene ID:

ENSAPLG00000012425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012984

8438396 - 8451270

12875