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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8514925_8527556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8514925 - 8527556

Intron Length:

12632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

CTGACCTTGACC

Flanking Amino Acid:

ELENASLVFTVYGHNVKSSN

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

78.6

35.9

Major BPS

61.3

0.28

52.7

34.2

Major PPT

79.1

0.65

0.8

73.3

31.7

Minor 5ss

35.7

-1.6

3.4

48.7

47.5

Minor BPS

68.4

0.56

1.4

70.43

41.4

Associated Gene:

Gene:

SYT17

Ensembl Gene ID:

ENSAPLG00000012300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037854

8511886 - 8527753

15868

ENSAPLT00000012810

8495395 - 8527753

32359