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Intron Name: Anas_platyrhynchos_platyrhynchos_15_854324_902915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

854324 - 902915

Intron Length:

48592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ATGCCACTGATG

Flanking Amino Acid:

GFGKQGFQCQVCCFVVHKRC

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

43.3

-0.6

1.9

48.32

38.9

Associated Gene:

Gene:

PRKCB

Ensembl Gene ID:

ENSAPLG00000008998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036133

793533 - 903744

110212

ENSAPLT00000009388

788846 - 903744

114899