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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8582408_8582600_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8582408 - 8582600

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATTAATT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TTTCTCTTTATA

Flanking Amino Acid:

MRLTDSASADQD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.1

64.8

38.6

Major BPS

53.6

0.09

59.9

32.5

Major PPT

88.3

0.86

0.6

84.3

23.8

Minor 5ss

48.1

-0.2

2.9

72.7

37.8

Minor BPS

64.6

0.45

1.6

76.23

34.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241