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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8582765_8586691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8582765 - 8586691

Intron Length:

3927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACACAGA

5'SS Class:

major

3'SS Sequence:

GCTTCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTGTTTTAATC

Flanking Amino Acid:

VHTDIQNEEKGGYSVNGGSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.4

43.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.3

0.57

0.8

68.7

31.8

Minor 5ss

-1.5

3.2

49.1

46.7

Minor BPS

57.9

0.23

1.4

60.33

40.5

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692