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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8591501_8595300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8591501 - 8595300

Intron Length:

3800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTAGG

5'SS Class:

major

3'SS Sequence:

TCCTATATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

GTATCCTATATT

Flanking Amino Acid:

EFIQQPENKLVLVKQLDNIL

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

66.5

44.4

Major BPS

84.6

0.86

41.2

Major PPT

0.56

0.9

69.2

35.4

Minor 5ss

31.6

-2.1

2.4

32.3

35.5

Minor BPS

53.7

0.2

73.44

43.3

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036531

8591372 - 8600002

8631

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692