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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8595360_8595996_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8595360 - 8595996

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

CCCAAAAATACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

TCTCCCCAAAAA

Flanking Amino Acid:

LTAIHDVLNESSKLLQELRQ

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

38.1

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

56.1

0.14

38.1

Minor 5ss

43.2

-0.7

2.9

49.2

Minor BPS

47.2

-0.2

2.1

62.95

42.8

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692

ENSAPLT00000036531

8591372 - 8600002

8631