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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8597038_8597142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8597038 - 8597142

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

AACTGCTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTCCCCAAAACT

Flanking Amino Acid:

YPHIFSTNFRDTVDILVGWH

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

38.1

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

74.3

0.55

0.9

69.8

40.6

Minor 5ss

-0.3

2.8

56.2

Minor BPS

55.5

0.25

78.49

43.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692