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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8597216_8597627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8597216 - 8597627

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CCTGTTTTAATC

Flanking Amino Acid:

QKPSLTQQVSGWLQSLEPFW

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.2

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

78.4

0.64

73.2

40.9

Minor 5ss

38.8

-1.3

2.9

46.2

Minor BPS

57.9

0.23

1.4

60.33

40.5

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692