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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8597726_8599295_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8597726 - 8599295

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

ATGTGCATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TGATATATAAAA

Flanking Amino Acid:

FLEDMEAYAEDLSHVASGES

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

76.9

0.67

66.3

40.4

Major PPT

0.38

40.9

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

47.6

-0.1

1.8

60.77

38.2

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692