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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8599470_8600419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8599470 - 8600419

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

PPITEAYVTDVLYRVMRCVT

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

86.6

28.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.4

0.71

0.8

73.9

41.2

Minor 5ss

41.8

-0.9

3.2

63.2

41.1

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692

ENSAPLT00000030382

8582400 - 8602640

20241