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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8601373_8602340_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8601373 - 8602340

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TCATACTCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GTTTCTTTATTT

Flanking Amino Acid:

LVLRYHKEKEVVAAAHAVYQ

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

78.9

35.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

59.6

0.22

1.1

56.8

38.5

Minor 5ss

-1.8

3.5

46.6

48.7

Minor BPS

70.4

0.72

1.5

84.38

36.8

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030382

8582400 - 8602640

20241

ENSAPLT00000012334

8580044 - 8637735

57692