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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8603319_8603964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8603319 - 8603964

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATATTT

Flanking Amino Acid:

VLYTLYSHCSRHDHFISSSL

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.5

0.57

0.9

66.5

39.8

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

55.7

0.26

1.8

79.9

36.7

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692