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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8604127_8604481_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8604127 - 8604481

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

LKKDNLTQDTRKLLMTWALE

Intron Amino Acid Position:

726

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

85.3

32.2

Major BPS

0.47

1.2

69.9

35.3

Major PPT

0.83

0.6

83.9

24.2

Minor 5ss

45.8

-0.4

2.6

41.5

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692