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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8607133_8607854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8607133 - 8607854

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTCTG

5'SS Class:

major

3'SS Sequence:

CCTGTTTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

CCTGTTTTAAAA

Flanking Amino Acid:

CANALTSPPKVIRTFFYTNR

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

66.5

44.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

65.1

0.34

1.1

37.2

Minor 5ss

40.3

-1.1

2.7

50.3

Minor BPS

53.1

0.09

1.5

58.98

41.6

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692