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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8611009_8611786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8611009 - 8611786

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CATTGAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TAAACATTGAAT

Flanking Amino Acid:

INLKADFNYIKSLSSFESGE

Intron Amino Acid Position:

1232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

78.3

36.2

Major BPS

0.3

62.3

30.4

Major PPT

71.3

0.48

63.2

41.7

Minor 5ss

38.8

-1.3

3.1

40.3

Minor BPS

49.7

0.06

1.8

68.55

41.3

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692