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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8612390_8612760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8612390 - 8612760

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAGGTTAA

5'SS Class:

major

3'SS Sequence:

ACTTTTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCTCCAATAACT

Flanking Amino Acid:

EQEQKWQSISENVIKYLKQT

Intron Amino Acid Position:

1318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

64.9

37.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

84.4

0.77

0.8

81.9

33.7

Minor 5ss

39.4

-1.2

3.1

44.6

Minor BPS

52.2

0.15

1.9

72.99

42.9

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692