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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8614612_8614910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8614612 - 8614910

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCATGATGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGATGT

Flanking Amino Acid:

IEKTKLLYTAGQSTHAMEML

Intron Amino Acid Position:

1495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

100

1.24

0.5

100

Major PPT

68.2

0.41

1.1

61.9

43.3

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

48.8

-0

2.2

78.23

43.6

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692