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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8616325_8616591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8616325 - 8616591

Intron Length:

267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

TTACATGTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

GAATCAATAACT

Flanking Amino Acid:

RWGRKVVDNASQGEGVRLLP

Intron Amino Acid Position:

1638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

66.7

0.41

57.8

Major PPT

75.4

0.57

68.5

41.6

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

55.2

0.24

1.9

74.03

41.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692