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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8618500_8618793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8618500 - 8618793

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTTTTCCAAAT

Flanking Amino Acid:

ISLSSESQASGNKLPSAIPT

Intron Amino Acid Position:

1875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

69.6

0.44

0.9

64.4

35.7

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

50.4

0.09

1.9

77.89

38.3

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692