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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8619360_8620351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8619360 - 8620351

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

ATTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAATA

Flanking Amino Acid:

KRVQNNNTLRKEEKIAIMRE

Intron Amino Acid Position:

1999

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

81.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.5

0.69

0.9

78.1

34.4

Minor 5ss

46.5

-0.4

3.1

66.5

Minor BPS

77.8

0.87

80.84

27.9

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692