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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8621644_8622240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8621644 - 8622240

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TAAATTAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTAAATTAACA

Flanking Amino Acid:

DGKNYPYLFKGLEDLHLDER

Intron Amino Acid Position:

2156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

61.8

0.27

1.1

55.2

43.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

63.5

0.42

1.8

79.01

36.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692