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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8622471_8623047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8622471 - 8623047

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TAATCTCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

QREAALQAQKAQDSYQTPQN

Intron Amino Acid Position:

2233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.8

0.53

0.8

71.2

35.2

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692