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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8623297_8623688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8623297 - 8623688

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ACTCTCTTTAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTTCCTGAAAC

Flanking Amino Acid:

TPDEWWRVTQSYARSTAVMS

Intron Amino Acid Position:

2316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

71.2

0.53

70.3

31.9

Major PPT

71.1

0.48

70.8

33.1

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

75.6

0.78

1.5

85.18

32.4

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692