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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8624026_8625008_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8624026 - 8625008

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATACATGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTCTGTTTAAAA

Flanking Amino Acid:

EGVFRLSCEQVLHIMRRGRE

Intron Amino Acid Position:

2399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

23.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

62.2

0.28

1.1

54.4

44.1

Minor 5ss

40.5

-1.1

2.7

50.7

45.7

Minor BPS

54.1

0.13

1.9

64.9

41.7

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692