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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8629356_8630611_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8629356 - 8630611

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

ETHTHYIDVARVLHAQYGEL

Intron Amino Acid Position:

2931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.65

83.5

30.8

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692