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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8631043_8631268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8631043 - 8631268

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TTTCTCCTAAAA

Flanking Amino Acid:

LCGTFSKTLSGISSLEDQNA

Intron Amino Acid Position:

3045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

77.9

0.69

78.3

31.3

Major PPT

70.2

0.45

1.1

72.4

31.3

Minor 5ss

-1.9

3.1

41.6

Minor BPS

0.28

1.8

74.93

35.7

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692