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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8634481_8634701_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8634481 - 8634701

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTCTGTTTATTT

Flanking Amino Acid:

DLELRLLQRVGTGLEHPIGS

Intron Amino Acid Position:

3359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.6

0.76

0.8

82.1

34.6

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

53.6

0.19

74.81

43.2

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692