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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8635894_8636608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8635894 - 8636608

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTG

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GATTTATTAACT

Flanking Amino Acid:

AATYQPTFAAAVRSNTGQKT

Intron Amino Acid Position:

3541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.4

36.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.8

72.3

31.7

Minor 5ss

41.6

-0.9

3.1

56.3

47.9

Minor BPS

0.71

1.6

83.25

Associated Gene:

Gene:

SMG1

Ensembl Gene ID:

ENSAPLG00000011764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012334

8580044 - 8637735

57692