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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8642710_8644400_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8642710 - 8644400

Intron Length:

1691

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTAGTAATAACA

Flanking Amino Acid:

EGDNNSAYQLAAETASLEEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

86.7

0.83

0.8

84.9

29.9

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

48.8

-0

1.9

66.12

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012214

8642674 - 8648237

5564