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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8838628_8842084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8838628 - 8842084

Intron Length:

3457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTTAGTTTG

5'SS Class:

major

3'SS Sequence:

TGCTGTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGCTGTTTTACA

Flanking Amino Acid:

SFHTAGDNSCRYYPMGHPVS

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

71.2

41.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

40.7

-1

2.7

52.1

44.4

Minor BPS

49.3

-0

2.1

63.48

42.9

Associated Gene:

Gene:

XYLT1

Ensembl Gene ID:

ENSAPLG00000010819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011300

8823813 - 8916266

92454