Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_8842348_8846046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8842348 - 8846046

Intron Length:

3699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTATCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CCTTTTGTATCC

Flanking Amino Acid:

FKPADFHRFQQTARPTFFAR

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

72.9

0.52

0.9

65.7

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

45.2

-0.3

2.2

56.41

43.2

Associated Gene:

Gene:

XYLT1

Ensembl Gene ID:

ENSAPLG00000010819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011300

8823813 - 8916266

92454