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Intron Name: Anas_platyrhynchos_platyrhynchos_15_8884893_8915438_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8884893 - 8915438

Intron Length:

30546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

TGTTTTTGAACA

Flanking Amino Acid:

EKVTRFCALEGKANNNVQWD

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

0.59

73.3

40.9

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

68.6

0.58

1.3

76.57

34.1

Associated Gene:

Gene:

XYLT1

Ensembl Gene ID:

ENSAPLG00000010819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011300

8823813 - 8916266

92454