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Intron Name: Anas_platyrhynchos_platyrhynchos_15_919738_919890_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
919738 - 919890

Intron Length:
153

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCGTGAG

5'SS Class:
strong_major

3'SS Sequence:
TACCTCCCCAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAC

U12 Branch Point Sequence:
TCTCTTTTACCT

Flanking Amino Acid:
LAGLLVGALVRLLIGDRTTR

Intron Amino Acid Position:
245

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
68.6
38.4

Major BPS
74.2
0.6
1
67
39.4

Major PPT
60.4
0.24
1
59.8
29.8

Minor 5ss
25.5
-2.8
3.1
30.6
43.3

Minor BPS
60.3
0.4
1.6
76.22
41

Associated Gene:

Gene:
AQP8

Ensembl Gene ID:

Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

916745 - 925694
8950

916745 - 925694
8950